BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B09SP1|AL428501
(303 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1588 596 e-171
>3x_Contig1588
Length = 14692
Score = 596 bits (300), Expect = e-171
Identities = 300/300 (100%)
Strand = Plus / Minus
Query: 2 gatccctccaccagtatttaatgctgccattgaaccaaaaacattgggtaacaaaaagcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8621 gatccctccaccagtatttaatgctgccattgaaccaaaaacattgggtaacaaaaagcc 8562
Query: 62 aatggaacaagctttgtcacaattgactagagaagacccctcccttgtggtaacacatga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8561 aatggaacaagctttgtcacaattgactagagaagacccctcccttgtggtaacacatga 8502
Query: 122 tgaggagactggacaaactttgttgagcggtatgggggagttacacttggatattgcgag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8501 tgaggagactggacaaactttgttgagcggtatgggggagttacacttggatattgcgag 8442
Query: 182 agatagactattgaacgaattaaatgcacaagttgatgttgaaagagttattgtctccta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8441 agatagactattgaacgaattaaatgcacaagttgatgttgaaagagttattgtctccta 8382
Query: 242 caaagaaacattaaatcattctacccaagaaaaaacgttggaaaccgatgatggatacaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8381 caaagaaacattaaatcattctacccaagaaaaaacgttggaaaccgatgatggatacaa 8322
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2427
Number of Sequences: 1807
Number of extensions: 2427
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 303
length of database: 10,358,551
effective HSP length: 16
effective length of query: 287
effective length of database: 10,329,639
effective search space: 2964606393
effective search space used: 2964606393
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)